1.PCsRNAdb: a comprehensive resource of small noncoding RNAs across cancers, Nucleic Acids Research, 2025
2.Personalized risk strati cation in colorectal cancer via PIANOS system, Nature Communications, 2025
3.SegMamba-V2: Long-range Sequential ModelingMamba For General 3D Medical Image Segmentation, IEEE Transactions on Medical Imaging, 2025
4.CRCFound: A Colorectal Cancer CT Image Foundation Model Based on Self-Supervised Learning, Advanced Sciences, 2025
5.Interpretable Multimodal Fusion Model for Bridged Histology and Genomics Survival Prediction in Pan-Cancer, Advanced Science, 2025
6.Challenges in AI-driven Biomedical Multimodal Data Fusion and Analysis, Genomics Proteomics and Bioinformatics, 2025
7.Immunological microenvironment differences between left and right colon cancer: dynamic interactions of CASC15+ KLK6+ epithelial subpopulation with T cells and mast cells, International Journal of Surgery, 2025
8.Lactylation of SLC26A3 in the Acidic Tumor Microenvironment Promotes Malignant Progression of Colorectal Carcinoma, Cell Death & Disease, 2025
9.TMO-Net: An Explainable Pretrained Multi-omics Model for Multi-task Learning in Oncology, Genome Biology, 2024
10.Deciphering Tertiary Lymphoid Structure Heterogeneity Reveals Prognostic Signature and Therapeutic Potentials for Colorectal Cancer: A Multicenter Retrospective Cohort Study, International Journal of Surgery, 2024
11.Senescence‐based Colorectal Cancer Subtyping Reveals Distinct Molecular Characteristics and Therapeutic Strategies, MedComm, 2023
12.A Longitudinal MRI-based Artificial Intelligence System to Predict Pathological Complete Response after Neoadjuvant Therapy in Rectal Cancer: A Multicenter Validation Study, Diseases of the Colon & Rectum, 2023
13.The Growth Pattern of Liver Metastases on MRI Predicts Early Recurrence in Patients with Colorectal Cancer: A Multicenter Study, European Radiology, 2022
14.Segmentation Only Uses Sparse Annotations: Unified Weakly and Semi-supervised Learning in Medical Images, Medical Image Analysis, 2022
15.CT-based Radiogenomic Analysis Dissects Intratumor Heterogeneity and Predicts Prognosis of Colorectal Cancer: A Multi-institutional Retrospective Study, Journal of Translational Medicine, 2022
16.A Novel Cell‐free DNA Methylation‐based Model Improves the Early Detection of Colorectal Cancer, Molecular Oncology, 2021
17.Predicting Treatment Response from Longitudinal Images Using Multi-task Deep Learning, Nature Communications, 2021
18.Genome-wide Discovery of a Novel Gene-expression Signature for the Identification of Lymph Node Metastasis in Esophageal Squamous Cell Carcinoma, Annals of Surgery, 2019
19.Long-read RNA Sequencing Identifies Alternative Splice Variants in Hepatocellular Carcinoma and Tumor-specific Isoforms, Hepatology, 2019
20.DeepCC: A Novel Deep Learning-based Framework for Cancer Molecular Subtype Classification, Oncogenesis, 2019
21.A Genome-wide Transcriptomic Approach Identifies a Novel Gene Expression Signature for the Detection of Lymph Node Metastasis in Patients with Early-stage Gastric Cancer, EBioMedicine, 2019
22.RNAMethyPro: A Biologically Conserved Signature of N6-methyladenosine Regulators for Predicting Survival at Pan-cancer Level, NPJ Precision Oncology, 2019
23.Gene Expression Signature in Surgical Tissues and Endoscopic Biopsies Identifies High-risk T1 Colorectal Cancers, Gastroenterology, 2019
24.Genome-wide Discovery and Identification of a Novel miRNA Signature for Recurrence Prediction in Stage II and III Colorectal Cancer, Clinical Cancer Research, 2018
25.A microRNA signature associated with metastasis of T1 colorectal cancers to lymph nodes, Gastroenterology, 2018
